Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954191.1_cds_XP_016493114.1_83259
CDS Infomation

[gene=LOC107812505] [db_xref=GeneID:107812505] [protein=homeobox-leucine zipper protein ROC8-like] [protein_id=XP_016493114.1] [location=join(25690..25802,26696..26813,29250..29441,30891..31403,32159..32251,32618..32827,33639..33813,34280..34326)] [gbkey=CDS]
Sequence

ATGGATGATTCTGGGAATGAACAAATTGGAGAATCCTCAAGCTCTAGAAAAAGATCAAGG
AGGCAGAAGCTGTGCAACAGACATTCTGTGGAACAAATTCAGCAGCTTGAAACATTTTTC
AAGGAATGTCCACATCCAGATGAGAACCAGCGACGTCAATTGAGTAGGGAAATAGGGCTT
GATCCTAAGCAGATCAAGTTTTGGTTTCAAAACAAAAGAACTCAAACAAAGGCACTAAGT
GAGAGAGCAGACAACAATATTCTTCGAACAGAAAATGAAAGATTTCATTGTGAGAATATG
GCAATGAGAGAGGCACTGAAAAATATTATTTGCCCACACTGTGATGGTCCACCCCCTGGA
GAAGAAGAAAGGAAACGTAATTTAGAAAAAATGAAAATGGCAAATCAACGTTTGAGAGAT
GAGCATGAAAGAATATCTAATTTGATCTCCAATTTTGTGGGAAGGTCTTTTGCAATGACT
TCACAATTAGCACCACAAAATAATGTTGGATCTTTATCAAGTTCATCTGATGAAAGTTTG
GTTAGCCAAAATATAATTAACTCTCCCATTGAAAATCAACCAAATAATGTTCGAGGAAAT
TCAACAGCTAATATTCCACCGCCACTACTACCACCACCACCACCACCGCCGCCATTTGAA
GAAAACGAAGAAATTCGTGTTGACCGGGAAAAATCAATAATATTTGGGACTGTGATTACT
GCAACAGATGAAATTGTGGAGCTTTTCCAAATGAATGAACCAATTTGGATTAAGTCACAA
ATTGATGGGAGATATTTTATTAATCGTGAAAGTTATGAAAAGATTTATCCAAAGCCAAAT
CAAGCTTATAAATCTGCTGCTCGTATTGAATCATCAAAGGAATCTGGAGTTGTGACAATG
ACTGCAATTGAGCTGATTCAAATATTTCTTGATCCAGTCAGATACATGAACATGTTTCCT
ACTATTGTCACAAAAGCTAGGACAATTGAAGTTGTTGATACTGAGAATTTCGGAGGCTCT
GTACAATTGATGTATGAAAAGTTACATATTCTATCTCCTCTTGTGGGAGCTAGAGATTTT
TTCTTCATTCGTTGTTGTCGACAACTTGATCCAACAACATGGACAATGGTTGATGTTTCA
TTTGATAATTTAAGAGAAATTCAAAGTGGTGGACCTTCTCAGTCATGGAAGTTTCCTTCT
GGCTGTGTTATTCAAGATTTGGGCAATGGGAAAAGTATGGTTACTTGGCTTGAGCATGTT
CATGTGGATGACAAAACTCATACTAATCGTCTCTATAGAGATTTAGTGTGTGGTCGTCAA
ACATTTGGAGCTAAGAGATGGATAATTACACTTCAAAGGATGTCTGAGAGGCACAATTTT
GCAATGAATGCAAACAATCATGATTTTGGAGGAGCTAGGGGGACCTTTTTCTTTCTCAAA
GTAAACTTCTTCGCTCGTTAG

Peptide Sequence

PEP ID

XP_016493114.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein ROC8-like [Nicotiana tabacum]
Sequence

MDDSGNEQIGESSSSRKRSRRQKLCNRHSVEQIQQLETFFKECPHPDENQRRQLSREIGL
DPKQIKFWFQNKRTQTKALSERADNNILRTENERFHCENMAMREALKNIICPHCDGPPPG
EEERKRNLEKMKMANQRLRDEHERISNLISNFVGRSFAMTSQLAPQNNVGSLSSSSDESL
VSQNIINSPIENQPNNVRGNSTANIPPPLLPPPPPPPPFEENEEIRVDREKSIIFGTVIT
ATDEIVELFQMNEPIWIKSQIDGRYFINRESYEKIYPKPNQAYKSAARIESSKESGVVTM
TAIELIQIFLDPVRYMNMFPTIVTKARTIEVVDTENFGGSVQLMYEKLHILSPLVGARDF
FFIRCCRQLDPTTWTMVDVSFDNLREIQSGGPSQSWKFPSGCVIQDLGNGKSMVTWLEHV
HVDDKTHTNRLYRDLVCGRQTFGAKRWIITLQRMSERHNFAMNANNHDFGGARGTFFFLK
VNFFAR

Transcript Sequence

Gene sequence data has not been registered.